Morphological Operators

This module provides 3D morphological operations, including closing, dilation, and erosion, for spatial transcriptomics data to refine structural regions. It also supports quantitative analysis by computing volume and surface area of selected cellular regions, along with mesh reconstruction.

Contents:

• Morphological Operators
  • visualize the tumor region
  • voxelize tumor region
  • downsampling along x,y
  • Morphologiy closing
  • Morphology dilate to get peritumoral region
  • Morphology erode to get tumor boundary
  • Morphology characteristic
  • Mesh reconstruction